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Application for segmenting structures in 3D medical images.

ITK-SNAP provides semi-automatic segmentation using active contour methods, as well as manual delineation and image navigation. In addition to these core functions, ITK-SNAP offers many supporting utilities. Some of the core advantages of ITK-SNAP include:

  • Linked cursor for seamless 3D navigation
  • Manual segmentation in three orthogonal planes at once
  • A modern graphical user interface based on Qt
  • Support for many different 3D image formats, including NIfTI and DICOM
  • Support for concurrent, linked viewing, and segmentation of multiple images
  • Support for color, multi-channel, and time-variant images
  • 3D cut-plane tool for fast post-processing of segmentation results

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